misc_util_impl.hpp

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/*
 * Copyright (c) 2009-2015:  G-CSC, Goethe University Frankfurt
 * Author: Sebastian Reiter
 * 
 * This file is part of UG4.
 * 
 * UG4 is free software: you can redistribute it and/or modify it under the
 * terms of the GNU Lesser General Public License version 3 (as published by the
 * Free Software Foundation) with the following additional attribution
 * requirements (according to LGPL/GPL v3 §7):
 * 
 * (1) The following notice must be displayed in the Appropriate Legal Notices
 * of covered and combined works: "Based on UG4 (www.ug4.org/license)".
 * 
 * (2) The following notice must be displayed at a prominent place in the
 * terminal output of covered works: "Based on UG4 (www.ug4.org/license)".
 * 
 * (3) The following bibliography is recommended for citation and must be
 * preserved in all covered files:
 * "Reiter, S., Vogel, A., Heppner, I., Rupp, M., and Wittum, G. A massively
 *   parallel geometric multigrid solver on hierarchically distributed grids.
 *   Computing and visualization in science 16, 4 (2013), 151-164"
 * "Vogel, A., Reiter, S., Rupp, M., Nägel, A., and Wittum, G. UG4 -- a novel
 *   flexible software system for simulating pde based models on high performance
 *   computers. Computing and visualization in science 16, 4 (2013), 165-179"
 * 
 * This program is distributed in the hope that it will be useful,
 * but WITHOUT ANY WARRANTY; without even the implied warranty of
 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
 * GNU Lesser General Public License for more details.
 */
 
#ifndef __H__LIB_GRID__MISC_UTIL__IMPL__
#define __H__LIB_GRID__MISC_UTIL__IMPL__
 
#include "misc_util.h"
#include "lib_grid/grid/grid_util.h"
#include "vertex_util.h"
#include "edge_util.h"
#include "face_util.h"
#include "volume_util.h"
 
#include <limits>
 
namespace ug
{
 
template <class TElem>
UG_API
typename TElem::side*
GetSharedSide(Grid& grid, TElem* e1, TElem* e2)
{
  if(!TElem::HAS_SIDES)
    return NULL;
 
  typedef typename TElem::side  side_t;
  typename Grid::traits<side_t>::secure_container sides1;
  typename Grid::traits<side_t>::secure_container sides2;
 
  grid.associated_elements(sides1, e1);
  grid.associated_elements(sides2, e2);
 
  for(size_t i1 = 0; i1 < sides1.size(); ++i1){
    for(size_t i2 = 0; i2 < sides2.size(); ++i2){
      if(sides1[i1] == sides2[i2])
        return sides1[i1];
    }
  }
 
  return NULL;
}
GetSharedSide(Grid& grid, TElem* e1, TElem* e2) {…}
 
 
//  CalculateGridObjectCenter
template<class TAAPosVRT>
UG_API
inline
typename TAAPosVRT::ValueType
CalculateGridObjectCenter(const GridObject* o, TAAPosVRT& aaPosVRT)
{
  switch(o->base_object_id()){
    case VERTEX:  return CalculateCenter(static_cast<const Vertex*>(o), aaPosVRT);
    case EDGE:    return CalculateCenter(static_cast<const Edge*>(o), aaPosVRT);
    case FACE:    return CalculateCenter(static_cast<const Face*>(o), aaPosVRT);
    case VOLUME:  return CalculateCenter(static_cast<const Volume*>(o), aaPosVRT);
    default:
      UG_THROW("Unknown geometric-object type.");
  }
}
CalculateGridObjectCenter(const GridObject* o, TAAPosVRT& aaPosVRT) {…}
 
template<class TAAPosVRT, class TAAWeightVRT>
UG_API
inline
typename TAAPosVRT::ValueType
CalculateGridObjectCenter(const GridObject* o, TAAPosVRT& aaPosVRT,
                 TAAWeightVRT& aaWeight)
{
  switch(o->base_object_id()){
    case VERTEX:
      return CalculateCenter(static_cast<const Vertex*>(o), aaPosVRT, aaWeight);
    case EDGE:
      return CalculateCenter(static_cast<const Edge*>(o), aaPosVRT, aaWeight);
    case FACE:
      return CalculateCenter(static_cast<const Face*>(o), aaPosVRT, aaWeight);
    case VOLUME:
      return CalculateCenter(static_cast<const Volume*>(o), aaPosVRT, aaWeight);
    default:
      UG_THROW("Unknown geometric-object type.");
  }
}
CalculateGridObjectCenter(const GridObject* o, TAAPosVRT& aaPosVRT, {…}
 
 
//  CalculateCenter
template <class TIterator, class TAAPosVRT>
typename TAAPosVRT::ValueType
CalculateCenter(TIterator begin, TIterator end, TAAPosVRT& aaPos)
{
  int counter = 0;
  typename TAAPosVRT::ValueType center;
  VecSet(center, 0);
  for(TIterator iter = begin; iter != end; ++iter, ++counter)
    VecAdd(center, center, CalculateCenter(*iter, aaPos));
    
  if(counter > 0)
    VecScale(center, center, 1./(number)counter);
    
  return center;
}
CalculateCenter(TIterator begin, TIterator end, TAAPosVRT& aaPos) {…}
 
//  FindClosestByCoordinate
template<class TElem, class TVertexPositionAttachmentAccessor>
TElem* FindClosestByCoordinate(const typename TVertexPositionAttachmentAccessor::ValueType& coord,
            typename geometry_traits<TElem>::iterator iterBegin,
            typename geometry_traits<TElem>::iterator iterEnd,
            TVertexPositionAttachmentAccessor& aaPosVRT)
{
  if(iterBegin == iterEnd)
    return NULL;
 
  typename geometry_traits<TElem>::iterator iter = iterBegin;
  TElem* bestElem = *iter;
  number bestDistSq = VecDistanceSq(coord, CalculateCenter(bestElem, aaPosVRT));
  iter++;
 
  while(iter != iterEnd)
  {
    number distSq = VecDistanceSq(coord, CalculateCenter(*iter, aaPosVRT));
    if(distSq < bestDistSq)
    {
      bestDistSq = distSq;
      bestElem = *iter;
    }
 
    ++iter;
  }
 
  return bestElem;
}
TElem* FindClosestByCoordinate(const typename TVertexPositionAttachmentAccessor::ValueType& coord, {…}
 
template<class vector_t, class TIterator, class TAAPos>
void CalculateBoundingBox(vector_t& vMinOut, vector_t& vMaxOut,
              TIterator begin, TIterator end,
              TAAPos& aaPos)
{
  if(begin == end){
    VecSet(vMinOut, 0);
    VecSet(vMaxOut, 0);
    return;
  }
 
  vMinOut = vMaxOut = aaPos[GetVertex(*begin, 0)];
 
  const int dim = vector_t::Size;
 
//  iterate over all elements and find min and max values
  vector_t tmin, tmax;
  for(TIterator iter = begin; iter != end; ++iter){
    typename TIterator::value_type elem = *iter;
 
    for(size_t i_vrt = 0; i_vrt < NumVertices(elem); ++i_vrt){
      for(int i = 0; i < dim; ++i){
        vector_t& v = aaPos[GetVertex(elem, i_vrt)];
        if(v[i] < vMinOut[i])
          vMinOut[i] = v[i];
        else if(v[i] > vMaxOut[i])
          vMaxOut[i] = v[i];
      }
    }
  }
}
void CalculateBoundingBox(vector_t& vMinOut, vector_t& vMaxOut, {…}
 
//  NumSharedVertices
template <class TElemPtr1, class TElemPtr2>
size_t NumSharedVertices(Grid& grid, TElemPtr1 elem1, TElemPtr2 elem2)
{
  grid.begin_marking();
//  first mark all vertices of elem1
  for(size_t i = 0; i < elem1->num_vertices(); ++i)
    grid.mark(elem1->vertex(i));
 
//  now count how many of vertex 2 are marked.
  size_t counter = 0;
  for(size_t i = 0; i < elem2->num_vertices(); ++i){
    if(grid.is_marked(elem2->vertex(i)))
      ++counter;
  }
  
  grid.end_marking();
  
  return counter;
}
size_t NumSharedVertices(Grid& grid, TElemPtr1 elem1, TElemPtr2 elem2) {…}
 
//  EraseElements
template <class TElem>
void EraseElements(Grid& grid, typename geometry_traits<TElem>::iterator iterBegin,
            typename geometry_traits<TElem>::iterator iterEnd)
{
//  be careful to not invalidate the iterators.
  while(iterBegin != iterEnd)
  {
    TElem* e = *iterBegin;
    iterBegin++;
    grid.erase(e);
  }
}
void EraseElements(Grid& grid, typename geometry_traits<TElem>::iterator iterBegin, {…}
 
//  AssignIndices
template <class TElem>
void AssignIndices(typename geometry_traits<TElem>::iterator iterBegin,
          typename geometry_traits<TElem>::iterator iterEnd,
          Grid::AttachmentAccessor<TElem, AInt>& aaInt)
{
  int index = 0;
  while(iterBegin != iterEnd)
  {
    aaInt[*iterBegin] = index++;
    iterBegin++;
  }
}
void AssignIndices(typename geometry_traits<TElem>::iterator iterBegin, {…}
 
//  ElementDiameter
template <class TElem, class TAAPos>
number ElementDiameterSq(Grid& grid,
                         TAAPos& aaPos,
               TElem* elem)
{
  PointerConstArray<Vertex*> vVert;
  grid.associated_elements(vVert, elem);
 
  number max = 0.0;
  for(size_t i = 0; i < vVert.size(); ++i)
    for(size_t j = i+1; j < vVert.size(); ++j)
      max = std::max(max, VecDistanceSq(aaPos[vVert[i]], aaPos[vVert[j]]));
 
  return max;
}
number ElementDiameterSq(Grid& grid, {…}
 
template <class TAAPos>
number ElementDiameterSq(Grid& grid,
             TAAPos& aaPos,
             GridObject* elem)
{
  switch(elem->base_object_id()){
    case VERTEX: return ElementDiameterSq(grid, aaPos, static_cast<Vertex*>(elem));
    case EDGE: return ElementDiameterSq(grid, aaPos, static_cast<Edge*>(elem));
    case FACE: return ElementDiameterSq(grid, aaPos, static_cast<Face*>(elem));
    case VOLUME: return ElementDiameterSq(grid, aaPos, static_cast<Volume*>(elem));
    default: UG_THROW("ElementDiameterSq: Element type not found.")
  }
}
number ElementDiameterSq(Grid& grid, {…}
 
template <class TElem, class TAAPos>
number ElementDiameter(Grid& grid,
                       TAAPos& aaPos,
             TElem* elem)
{
  return std::sqrt(ElementDiameterSq(grid, aaPos, elem));
}
number ElementDiameter(Grid& grid, {…}
 
template <class TAAPos, class TIterator>
number MaxElementDiameter(Grid& grid, TAAPos& aaPos,
                          TIterator iter, TIterator iterEnd)
{
  number max = 0.0;
  for(; iter != iterEnd; ++iter)
    max = std::max(max, ElementDiameterSq(grid, aaPos, *iter));
 
#ifdef UG_PARALLEL
  // share value between all procs
  pcl::ProcessCommunicator com;
  max = com.allreduce(max, PCL_RO_MAX);
#endif
 
  return std::sqrt(max);
}
number MaxElementDiameter(Grid& grid, TAAPos& aaPos, {…}
 
template <class TAAPos, class TIterator>
number MinElementDiameter(Grid& grid, TAAPos& aaPos,
                          TIterator iter, TIterator iterEnd)
{
  number min = std::numeric_limits<number>::max();
  for(; iter != iterEnd; ++iter)
    min = std::min(min, ElementDiameterSq(grid, aaPos, *iter));
 
#ifdef UG_PARALLEL
  // share value between all procs
  pcl::ProcessCommunicator com;
  min = com.allreduce(min, PCL_RO_MIN);
#endif
 
  return std::sqrt(min);
}
number MinElementDiameter(Grid& grid, TAAPos& aaPos, {…}
 
 
template <class TElem1, class TElem2, class TAAPos>
typename TAAPos::ValueType
GetDirection (TElem1* e1, TElem2* e2, const TAAPos& aaPos)
{
  typedef typename TAAPos::ValueType vector_t;
 
  vector_t c1 = CalculateCenter (e1, aaPos);
  vector_t c2 = CalculateCenter (e2, aaPos);
 
  c2 -= c1;
  return c2;
}
GetDirection (TElem1* e1, TElem2* e2, const TAAPos& aaPos) {…}
 
template <class TElem1, class TElem2, class TAAPos>
bool CheckDirection (TElem1* e1,
                     TElem2* e2,
                     const TAAPos& aaPos,
                     const typename TAAPos::ValueType& dir,
                     number minAngle,
                     number maxAngle)
{
  typedef typename TAAPos::ValueType vector_t;
 
  const vector_t v = GetDirection (e1, e2, aaPos);
  const number angle = rad_to_deg(VecAngle(v, dir));
  return (minAngle <= angle) && (maxAngle >= angle);
}
bool CheckDirection (TElem1* e1, {…}
 
}// end of namespace
 
#endif