nested_iteration_impl.h

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/*
 * Copyright (c) 2010 - 2017:  G-CSC, Goethe University Frankfurt
 * Author: Arne Naegel
 * 
 * This file is part of UG4.
 * 
 * UG4 is free software: you can redistribute it and/or modify it under the
 * terms of the GNU Lesser General Public License version 3 (as published by the
 * Free Software Foundation) with the following additional attribution
 * requirements (according to LGPL/GPL v3 §7):
 * 
 * (1) The following notice must be displayed in the Appropriate Legal Notices
 * of covered and combined works: "Based on UG4 (www.ug4.org/license)".
 * 
 * (2) The following notice must be displayed at a prominent place in the
 * terminal output of covered works: "Based on UG4 (www.ug4.org/license)".
 * 
 * (3) The following bibliography is recommended for citation and must be
 * preserved in all covered files:
 * "Reiter, S., Vogel, A., Heppner, I., Rupp, M., and Wittum, G. A massively
 *   parallel geometric multigrid solver on hierarchically distributed grids.
 *   Computing and visualization in science 16, 4 (2013), 151-164"
 * "Vogel, A., Reiter, S., Rupp, M., Nägel, A., and Wittum, G. UG4 -- a novel
 *   flexible software system for simulating pde based models on high performance
 *   computers. Computing and visualization in science 16, 4 (2013), 165-179"
 * 
 * This program is distributed in the hope that it will be useful,
 * but WITHOUT ANY WARRANTY; without even the implied warranty of
 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
 * GNU Lesser General Public License for more details.
 */
 
#ifndef __H__UG__LIB_DISC__OPERATOR__NON_LINEAR_OPERATOR__NI_SOLVER__NI_IMPL__
#define __H__UG__LIB_DISC__OPERATOR__NON_LINEAR_OPERATOR__NI_SOLVER__NI_IMPL__
 
#include <iostream>
#include <sstream>
 
#include "nested_iteration.h"
#include "lib_disc/function_spaces/grid_function_util.h"
#include "common/util/string_util.h"
 
#define PROFILE_NESTED_ITER
#ifdef PROFILE_NESTED_ITER
  #define NESTED_ITER_PROFILE_FUNC()    PROFILE_FUNC_GROUP("NestedIteration")
  #define NESTED_ITER_PROFILE_BEGIN(name) PROFILE_BEGIN_GROUP(name, "NestedIteration")
  #define NESTED_ITER_PROFILE_END()   PROFILE_END()
#else
  #define NESTED_ITER_PROFILE_FUNC()
  #define NESTED_ITER_PROFILE_BEGIN(name)
  #define NESTED_ITER_PROFILE_END()
#endif
 
namespace ug{
 
template <typename TDomain, typename TAlgebra>
NestedIterationSolver<TDomain,TAlgebra>::
NestedIterationSolver(SmartPtr<ILinearOperatorInverse<vector_type> > LinearSolver) :
      m_spLinearSolver(LinearSolver),
      m_N(NULL),
      m_J(NULL),
      m_spAss(NULL),
      m_dgbCall(0),
      m_lastNumSteps(0),
      m_bUseAdaptiveRefinement(true),
      m_maxSteps(100), m_TOL(1e-3), m_absTOL(1e-12)
{};
NestedIterationSolver<TDomain,TAlgebra>:: {…}
 
template <typename TDomain, typename TAlgebra>
NestedIterationSolver<TDomain,TAlgebra>::
NestedIterationSolver() :
  m_spLinearSolver(NULL),
  m_N(NULL),
  m_J(NULL),
  m_spAss(NULL),
  m_dgbCall(0),
  m_lastNumSteps(0),
  m_bUseAdaptiveRefinement(true),
  m_maxSteps(100), m_TOL(1e-3), m_absTOL(1e-12)
{};
NestedIterationSolver<TDomain,TAlgebra>:: {…}
 
template <typename TDomain, typename TAlgebra>
NestedIterationSolver<TDomain,TAlgebra>::
NestedIterationSolver(SmartPtr<IOperator<vector_type> > N) :
  m_spLinearSolver(NULL),
  m_N(NULL),
  m_J(NULL),
  m_spAss(NULL),
  m_dgbCall(0),
  m_lastNumSteps(0),
  m_bUseAdaptiveRefinement(true),
  m_maxSteps(100), m_TOL(1e-3), m_absTOL(1e-12)
{
  init(N);
};
NestedIterationSolver<TDomain,TAlgebra>:: {…}
 
template <typename TDomain, typename TAlgebra>
NestedIterationSolver<TDomain,TAlgebra>::
NestedIterationSolver(SmartPtr<IAssemble<TAlgebra> > spAss) :
  m_spLinearSolver(NULL),
  m_N(NULL),
  m_J(NULL),
  m_spAss(spAss),
  m_spDomErr(spAss),
  m_dgbCall(0),
  m_lastNumSteps(0),
  m_baseLevel(0),
  m_bUseAdaptiveRefinement(true),
  m_maxSteps(100), m_TOL(1e-3), m_absTOL(1e-12)
{
  m_N = SmartPtr<AssembledOperator<TAlgebra> >(new AssembledOperator<TAlgebra>(m_spAss));
};
NestedIterationSolver<TDomain,TAlgebra>:: {…}
 
 
template <typename TDomain, typename TAlgebra>
NestedIterationSolver<TDomain,TAlgebra>::
NestedIterationSolver(SmartPtr<IAssemble<TAlgebra> > spAss, SmartPtr<IAssemble<TAlgebra> > spDomErr) :
  m_spLinearSolver(NULL),
  m_N(NULL),
  m_J(NULL),
  m_spAss(spAss),
  m_spDomErr(spDomErr),
  m_dgbCall(0),
  m_lastNumSteps(0),
  m_baseLevel(0),
  m_bUseAdaptiveRefinement(true)
{
  m_N = SmartPtr<AssembledOperator<TAlgebra> >(new AssembledOperator<TAlgebra>(m_spAss));
};
NestedIterationSolver<TDomain,TAlgebra>:: {…}
 
 
template <typename TDomain, typename TAlgebra>
bool NestedIterationSolver<TDomain,TAlgebra>::init(SmartPtr<IOperator<vector_type> > N)
{
  NESTED_ITER_PROFILE_BEGIN(NestedIterationSolver_init);
  m_N = N.template cast_dynamic<AssembledOperator<TAlgebra> >();
  if(m_N.invalid())
    UG_THROW("NestedIterationSolver: currently only works for AssembledDiscreteOperator.");
 
  m_spAss = m_N->discretization();
  return true;
}
bool NestedIterationSolver<TDomain,TAlgebra>::init(SmartPtr<IOperator<vector_type> > N) {…}
 
template <typename TDomain, typename TAlgebra>
bool NestedIterationSolver<TDomain,TAlgebra>::prepare(vector_type& u)
{
 
  return true;
}
bool NestedIterationSolver<TDomain,TAlgebra>::prepare(vector_type& u) {…}
 
 
 
template <typename TDomain, typename TAlgebra>
void NestedIterationSolver<TDomain,TAlgebra>::estimate_and_mark_domain(const grid_function_type& u, SmartPtr<IElementMarkingStrategy<TDomain> > spMarking, bool bClearMarks)
{
    UG_LOG("Computing error... "<< std::endl);
 
    typedef DomainDiscretization<TDomain, TAlgebra> domain_disc_type;
   //  typedef IDomainErrorIndicator<TAlgebra> domain_indicator_type;
 
    SmartPtr<domain_disc_type> spDomainEstimator = m_spDomErr.template cast_dynamic<domain_disc_type>();
 
    // some checks
    UG_ASSERT(spDomainEstimator.valid(), "Huhh: No estimatable object???")
    UG_ASSERT(m_spRefiner.valid(), "Huhh: Invalid refiner???");
 
    // compute error
    if (m_spElemError.valid()) {
      // debug version
      spDomainEstimator->calc_error(u, u.dd(), m_spElemError.get());
    } else {
      // standard version
      spDomainEstimator->calc_error(u, u.dd());
    }
 
    // set (new) marks
    if (bClearMarks) m_spRefiner->clear_marks();
    spDomainEstimator->mark_with_strategy(*m_spRefiner, spMarking);
    UG_LOG("Estimated error: " << spMarking->global_estimated_error());
 
 
 
 
}
void NestedIterationSolver<TDomain,TAlgebra>::estimate_and_mark_domain(const grid_function_type& u, SmartPtr<IElementMarkingStrategy<TDomain> > spMarking, bool bClearMarks) {…}
 
 
template <typename TDomain, typename TAlgebra>
number NestedIterationSolver<TDomain,TAlgebra>::coarsen_domain(const grid_function_type& u)
{
  /*typedef typename domain_traits<TDomain::dim>::element_type TElem;
  SmartPtr<DoFDistribution> spDD=u.dof_distribution();
  m_spRefiner->mark(spDD->begin<TElem>(), spDD->end<TElem>(), RM_COARSEN);
  m_spRefiner->coarsen();*/
  
  return 0; // dummy value
}
number NestedIterationSolver<TDomain,TAlgebra>::coarsen_domain(const grid_function_type& u) {…}
 
 
 
template <typename TDomain, typename TAlgebra>
bool NestedIterationSolver<TDomain,TAlgebra>::apply(vector_type& u)
{
#ifdef UG_PARALLEL
  // UG_ASSERT(0, "Not implemented!")
#endif
  NESTED_ITER_PROFILE_BEGIN(NestedIterationSolver_apply);
 
  //  increase call count
  m_dgbCall++;
  grid_function_type &usol = dynamic_cast<grid_function_type&>(u);
 
  UG_ASSERT (usol.grid_level().is_surface(), "Must supply surface grid function");
  UG_ASSERT (usol.grid_level().top(), "Must supply top level grid function");
  const GridLevel& surfGridLevel = usol.grid_level();
 
  // Check for linear solver.
  if(m_spLinearSolver.invalid())
    UG_THROW("NestedIterationSolver::apply: Linear Solver not set.");
 
  // Check for Jacobian.
  if(m_J.invalid() || m_J->discretization() != m_spAss) {
    m_J = make_sp(new AssembledLinearOperator<TAlgebra>(m_spAss));
  }
  m_J->set_level(m_N->level());
 
  UG_LOG("N level: "<<m_N->level()<< std::endl);
  UG_LOG("u level: "<< usol.grid_level() << std::endl);
 
  // Create tmp vectors
  SmartPtr<vector_type> spD = u.clone_without_values();
 
  std::string ext;  //char ext[50];
  int loopCnt = 0;
  m_lastNumSteps = 0;
  {
    //  write start defect for debug
    //snprintf(ext, sizeof(ext), "_call%03d", m_dgbCall);
    std::string name("NESTED_ITER_StartSolution");
    ext = GetStringPrintf("_call%03d", m_dgbCall);
    name.append(ext);
    write_debug(u, name.c_str());
  }
 
  // Assembly loop (from some coarse level to TOP)
  int surfLevel = usol.grid_level().level();  // todo: should start on coarse(r) levels
  m_topLevel = surfLevel+m_maxSteps;
  for (int lev=surfLevel; lev<m_topLevel; ++lev)
  {
    /* OLD LUA CODE:
     *  globalDisc:assemble_linear(A, b)
     *  globalDisc:adjust_solution(u)
     *  solver:init(A)
     *  solver:apply_return_defect(u,b)
     *  // globalDisc:adjust_solution(u)
     */
 
    // Assemble.
    NESTED_ITER_PROFILE_BEGIN(NestedIterationAssemble);
    m_spAss->assemble_linear(*m_J, *spD, surfGridLevel);   // todo: replace for non-linear problems
    m_spAss->adjust_solution(u, surfGridLevel);
    NESTED_ITER_PROFILE_END();
 
    //snprintf(ext, sizeof(ext),"_call%03d_iter%03d", m_dgbCall, loopCnt);
    ext = GetStringPrintf("_call%03d_iter%03d", m_dgbCall, loopCnt);
    {
      // write initial data for debug
      std::string name0("NESTED_ITER_InitialSolution"); name0.append(ext);
      write_debug(u, name0.c_str());
      std::string name("NESTED_ITER_InitialDefect"); name.append(ext);
      write_debug(*spD, name.c_str());
 
      //  Write Jacobian for debug
      std::string matname("NESTED_ITER_Jacobian");
      matname.append(ext);
      write_debug(m_J->get_matrix(), matname.c_str());
    }
 
    // Initialize inverse of Jacobian.
    try{
      NESTED_ITER_PROFILE_BEGIN(NestedIterationPrepareLinSolver);
      if(!m_spLinearSolver->init(m_J, u))
      {
        UG_LOG("ERROR in 'NestedIterationSolver::apply': Cannot init Inverse Linear "
            "Operator for Jacobi-Operator.\n");
        return false;
      }
      NESTED_ITER_PROFILE_END();
    }UG_CATCH_THROW("NestedIterationSolver::apply: Initialization of Linear Solver failed.");
 
    // Solve linearized system.
    try{
      NESTED_ITER_PROFILE_BEGIN(NewtonApplyLinSolver);
      if(!m_spLinearSolver->apply(u, *spD))
      {
        UG_LOG("ERROR in 'NestedIterationSolver::apply': Cannot apply Inverse Linear "
            "Operator for Jacobi-Operator.\n");
        return false;
      }
      NESTED_ITER_PROFILE_END();
    }UG_CATCH_THROW("NestedIterationSolver::apply: Application of Linear Solver failed.");
 
    // Adjust solution.
    m_spAss->adjust_solution(u, surfGridLevel);
    {
      //  write defect for debug
      std::string name("NESTED_ITER_FinalDefect"); name.append(ext);
      write_debug(*spD, name.c_str());
      std::string name3("NESTED_ITER_FinalSolution"); name3.append(ext);
      write_debug(u, name3.c_str());
    }
 
    // Update counter.
    loopCnt++;
 
    // Quit?
    if (use_adaptive_refinement() == false) {
      UG_LOG("SUCCESS: Non-adaptive version!" <<  std::endl);
      break;
    }
 
    // Estimate and mark domain.
    this->estimate_and_mark_domain(usol, m_spRefinementMarking);
 
    //  OPTIONAL: write defect for debug
    if (m_spElemError.valid())
    {
      std::string name("NESTED_ITER_Error");
      name.append(ext);
      VTKOutput<TDomain::dim> outError;
      outError.print(name.c_str(), *m_spElemError);
    }
 
    // Check error.
    const number err = m_spRefinementMarking->global_estimated_error();
    double desiredTOL = (m_spAssociatedSpace.valid()) ? m_TOL*m_spAssociatedSpace->norm(usol) + m_absTOL : m_TOL;
 
    UG_LOG("NI *** Desired tolerance: " << m_TOL << " * "<<  m_spAssociatedSpace->norm(usol) <<  " + "<< m_absTOL <<std::endl);
 
    // Quit or continue?
    if(err < desiredTOL)
    {
      // Quit.
      UG_LOG("SUCCESS: Error smaller than tolerance: " << err << " < "<< desiredTOL << std::endl);
      break;
    } else {
      // Refine and continue.
      UG_LOG("FAILED: Error (still) greater than tolerance: " << err << " > "<< desiredTOL << std::endl);
      m_spRefiner->refine();
    }
  }
 
 
  return true;
}
bool NestedIterationSolver<TDomain,TAlgebra>::apply(vector_type& u) {…}
 
 
template <typename TDomain, typename TAlgebra>
std::string NestedIterationSolver<TDomain,TAlgebra>::config_string() const
{
  std::stringstream ss;
  ss << "NestedIterationSolver\n";
  ss << " LinearSolver: ";
  if(m_spLinearSolver.valid())  ss << ConfigShift(m_spLinearSolver->config_string()) << "\n";
  else              ss << " NOT SET!\n";
  return ss.str();
}
std::string NestedIterationSolver<TDomain,TAlgebra>::config_string() const {…}
 
 
}
 
#endif /* __H__UG__LIB_DISC__OPERATOR__NON_LINEAR_OPERATOR__NESTED_ITER_SOLVER__NESTED_ITER_IMPL__ */