new_layout_creator.h

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/*
 * Copyright (c) 2011-2015:  G-CSC, Goethe University Frankfurt
 * Author: Martin Rupp
 * 
 * This file is part of UG4.
 * 
 * UG4 is free software: you can redistribute it and/or modify it under the
 * terms of the GNU Lesser General Public License version 3 (as published by the
 * Free Software Foundation) with the following additional attribution
 * requirements (according to LGPL/GPL v3 §7):
 * 
 * (1) The following notice must be displayed in the Appropriate Legal Notices
 * of covered and combined works: "Based on UG4 (www.ug4.org/license)".
 * 
 * (2) The following notice must be displayed at a prominent place in the
 * terminal output of covered works: "Based on UG4 (www.ug4.org/license)".
 * 
 * (3) The following bibliography is recommended for citation and must be
 * preserved in all covered files:
 * "Reiter, S., Vogel, A., Heppner, I., Rupp, M., and Wittum, G. A massively
 *   parallel geometric multigrid solver on hierarchically distributed grids.
 *   Computing and visualization in science 16, 4 (2013), 151-164"
 * "Vogel, A., Reiter, S., Rupp, M., Nägel, A., and Wittum, G. UG4 -- a novel
 *   flexible software system for simulating pde based models on high performance
 *   computers. Computing and visualization in science 16, 4 (2013), 165-179"
 * 
 * This program is distributed in the hope that it will be useful,
 * but WITHOUT ANY WARRANTY; without even the implied warranty of
 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
 * GNU Lesser General Public License for more details.
 */
 
#ifndef __H__LIB_ALGEBRA__PARALLELIZATION__NEW_LAYOUT_CREATOR_H_
#define __H__LIB_ALGEBRA__PARALLELIZATION__NEW_LAYOUT_CREATOR_H_
 
namespace ug
{
 
class NewLayoutCreator
{
private:
  void create_mark_map(IndexLayout &masterLayout)
  {
    PROFILE_FUNC();
    UG_DLOG(LIB_ALG_MATRIX, 4, "\n\nGenerateOverlapClass::CreateMarks\n");
    notified.clear();
    for(IndexLayout::iterator iter = masterLayout.begin(); iter != masterLayout.end(); ++iter)
    {
      IndexLayout::Interface &interface = masterLayout.interface(iter);
      int pid = masterLayout.proc_id(iter);
 
      std::set<size_t> &mark = notified[pid];
      for(IndexLayout::Interface::iterator iter2 = interface.begin(); iter2 != interface.end(); ++iter2)
      {
        size_t localIndex = interface.get_element(iter2);
        mark.insert(localIndex);
      }
    }
  }
  void create_mark_map(IndexLayout &masterLayout) {…}
  struct NewSlaveNotification
  {
    NewSlaveNotification() : id() {}
    NewSlaveNotification(const AlgebraID &_id, int _newSlaveOnPID)
    {
      id = _id;
      newSlaveOnPID = _newSlaveOnPID;
    }
    NewSlaveNotification(const AlgebraID &_id, int _newSlaveOnPID) {…}
    friend std::ostream &operator << (std::ostream &out, const NewSlaveNotification &n)
    {
      out << "notification that node " << n.id << " is slave on " << n.newSlaveOnPID << " ";
      return out;
    }
    friend std::ostream &operator << (std::ostream &out, const NewSlaveNotification &n) {…};
    AlgebraID id;
    int newSlaveOnPID;
  };
  struct NewSlaveNotification {…};
 
private:
  typedef std::map<int, BinaryBuffer> BufferMap;
 
  ParallelNodes &PN;
  std::set<int> masterPIDs;
  std::set<int> slavePIDs;
 
  BufferMap notificationBufferMap;
 
 
  std::map<int, std::set<size_t> > notified; // notified[pid] is the set of indices which are slave on pid.
  std::map<int, std::vector<NewSlaveNotification> > newSlaveNotifications; // newSlaveNotifications is a vector of pids
  std::map<int, std::set<size_t> > newMasters;
  std::map<int, std::set<size_t> > newSlaves;
 
public:
 
  NewLayoutCreator(ParallelNodes &_PN, IndexLayout &masterLayout, IndexLayout &slaveLayout)
    : PN(_PN)
  {
    for(IndexLayout::iterator it = slaveLayout.begin(); it != slaveLayout.end(); ++it)
      slavePIDs.insert(slaveLayout.proc_id(it));
    for(IndexLayout::iterator it = masterLayout.begin(); it != masterLayout.end(); ++it)
      masterPIDs.insert(masterLayout.proc_id(it));
    create_mark_map(masterLayout);
  }
  NewLayoutCreator(ParallelNodes &_PN, IndexLayout &masterLayout, IndexLayout &slaveLayout) {…}
  size_t create_slave_node(const AlgebraID &globalID, int distanceToMasterOrInner)
  {
    bool bCreated;
    size_t localIndex = PN.get_local_index_or_create_new(globalID, distanceToMasterOrInner, bCreated);
 
    if(bCreated)
    {
      newSlaves[globalID.master_proc()].insert(localIndex);
      UG_DLOG(LIB_ALG_MATRIX, 4, "created new slave with GID " << globalID << " with local index " << localIndex << " and distanceToMasterOrInner=" << distanceToMasterOrInner << "\n");
    }
    return localIndex;
  }
  size_t create_slave_node(const AlgebraID &globalID, int distanceToMasterOrInner) {…}
 
 
  void create_node(const AlgebraID &globalID, int pid)
  {
    create_node(globalID, PN.global_to_local(globalID), pid);
  }
  void create_node(const AlgebraID &globalID, int pid) {…}
 
  void create_node(size_t localIndex, int pid)
  {
    create_node(PN.local_to_global(localIndex), localIndex, pid);
  }
  void create_node(size_t localIndex, int pid) {…}
 
 
  void create_node(const AlgebraID &globalID, size_t localIndex, int pid)
  {
    if(globalID.master_proc() == pid) // obviously the owner knows that his node is on his processor
      return;
 
    if(notified[pid].find(localIndex) != notified[pid].end())
    {
      UG_DLOG(LIB_ALG_MATRIX, 4, " not sending notification because already send one\n");
      return;
    }
 
    /*IF_DEBUG(LIB_ALG_MATRIX, 4)
    {
      newNodesOn[pid].insert(globalID);
    }*/
 
    notified[pid].insert(localIndex);
 
    if(globalID.master_proc() == pcl::ProcRank())
    {
      // add i to mNewLayout[pid] if not already in some interface to pid.
 
      // only add nodes once to interface
      UG_DLOG(LIB_ALG_MATRIX, 4, " adding node " << localIndex << " to master interface to processor " << pid << "\n");
      newMasters[pid].insert(localIndex);
    }
    else
    {
      //  prepare to send a notification to owner of (globalColIndex.master_proc()) that globalColIndex has a copy on pid if not already done so
 
      NewSlaveNotification notification(globalID, pid);
      UG_DLOG(LIB_ALG_MATRIX, 4, "sending " << globalID.master_proc() << " " << notification << "\n");
      newSlaveNotifications[globalID.master_proc()].push_back(notification);
    }
  }
  void create_node(const AlgebraID &globalID, size_t localIndex, int pid) {…}
 
  /*void check_new_nodes(pcl::InterfaceCommunicator<IndexLayout> &communicator,
        IndexLayout &sendingLayout, IndexLayout &receivingLayout)
  {
    std::set<int> sendingPIDs;
    for(IndexLayout::iterator it = sendingLayout.begin(); it != sendingLayout.end(); ++it)
      sendingPIDs.insert(sendingLayout.proc_id(it));
 
    std::set<int> receivingPIDs;
    for(IndexLayout::iterator it = receivingLayout.begin(); it != receivingLayout.end(); ++it)
      receivingPIDs.insert(receivingLayout.proc_id(it));
    check_new_nodes(commnunicator, sendingPIDs, receivingPIDs);
  }
 
  void check_new_nodes(std::vector<int> sendingPIDs, std::vector<int> receivingPIDs)
  {
    for(size_t i=0; i<sendingPIDs.size(); i++)
    {
      BinaryBuffer buf;
      int pid = sendingPIDs[i];
      Serialize(buf, newNodesOn[pid]);
      communicator.send_raw(pid, buf.buffer(), buf.write_pos(), false);
    }
 
    for(size_t i=0; i<receivingPIDs.size(); i++)
      communicator.receive_raw(pid, newNodesBufferMap[receivingPIDs[i]]);
 
    communicator.communicate();
  }*/
 
  void issue(pcl::InterfaceCommunicator<IndexLayout> &communicator)
  {
    UG_DLOG(LIB_ALG_MATRIX, 4, "NewLayoutCreator::issue\n");
    // notifications for new Master Nodes
    for(std::set<int>::iterator it = slavePIDs.begin(); it != slavePIDs.end(); ++it)
    {
      BinaryBuffer buf;
      int pid = *it;
      for(size_t i=0; i<newSlaveNotifications[pid].size(); i++)
        Serialize(buf, newSlaveNotifications[pid][i]);
      UG_DLOG(LIB_ALG_MATRIX, 4, " sending " << newSlaveNotifications[pid].size() << " notifications to processor " << pid << " (" << buf.write_pos() << " bytes)\n");
      communicator.send_raw(pid, buf.buffer(), buf.write_pos(), false);
    }
    newSlaveNotifications.clear();
 
    for(std::set<int>::iterator it = masterPIDs.begin(); it != masterPIDs.end(); ++it)
    {
      int pid = *it;
      UG_DLOG(LIB_ALG_MATRIX, 4, " issue receive from processor " << pid << "\n");
      communicator.receive_raw(pid, notificationBufferMap[pid]);
    }
  }
  void issue(pcl::InterfaceCommunicator<IndexLayout> &communicator) {…}
 
  void process()
  {
    UG_DLOG(LIB_ALG_MATRIX, 4, "NewLayoutCreator::process\n");
    for(std::set<int>::iterator it = masterPIDs.begin(); it != masterPIDs.end(); ++it)
    {
      int pid = *it;
      BinaryBuffer &buf = notificationBufferMap[pid];
      UG_DLOG(LIB_ALG_MATRIX, 4, "received " << buf.write_pos() << " bytes of notification from pid " << pid << ":\n");
      while(!buf.eof())
      {
        NewSlaveNotification notification;
        Deserialize(buf, notification);
        UG_ASSERT(notification.id.master_proc() == pcl::ProcRank(), notification.id << ", pid = " << pcl::ProcRank());
        UG_DLOG(LIB_ALG_MATRIX, 4, notification << "\n");
 
        std::set<size_t> &mark = notified[notification.newSlaveOnPID];
        if(mark.find(notification.id.index_on_master()) == mark.end())
        {
          newMasters[notification.newSlaveOnPID].insert(notification.id.index_on_master());
          mark.insert(notification.id.index_on_master());
        }
 
      }
    }
 
    /*for(BufferMap::iterator it = newNodesBufferMap.begin(); it != newNodesBufferMap.end(); ++it)
    {
      int pid = it->first;
      BinaryBuffer &buf = it->second;
      std::set<AlgebraID> newNodes;
      Deserialize(buf, newNodes);
      bool bCreated;
      for(std::set<AlgebraID>::iterator it = newNodes.begin(); it != newNodes.end(); ++it)
      {
        AlgebraID &globalID = (*it);
        int localIndex = PN.get_local_index_or_create_new(globalID, distanceToMasterOrInner, bCreated);
        if(bCreated)
          newSlaves[pid].insert(localIndex);
      }
    }*/
  }
  void process() {…}
 
  void add_new_layouts_to(IndexLayout &newMasterLayout, IndexLayout &newSlaveLayout)
  {
    PN.insert_into_layout_sorted(newMasters, newMasterLayout);
    PN.insert_into_layout_sorted(newSlaves, newSlaveLayout);
    for(std::map<int, std::set<size_t> >::iterator it = newMasters.begin(); it != newMasters.end(); ++it)
      masterPIDs.insert(it->first);
    for(std::map<int, std::set<size_t> >::iterator it = newSlaves.begin(); it != newSlaves.end(); ++it)
      slavePIDs.insert(it->first);
    newMasters.clear();
    newSlaves.clear();
  }
  void add_new_layouts_to(IndexLayout &newMasterLayout, IndexLayout &newSlaveLayout) {…}
};
class NewLayoutCreator {…};
 
}
 
#endif /* NEW_LAYOUT_CREATOR_H_ */