sparsematrix_boost.h

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/* Copyright (c) 2022:  G-CSC, Goethe University Frankfurt
 * Felix Salfelder 2022
 * This file is part of UG4.
 *
 * UG4 is free software: you can redistribute it and/or modify it under the
 * terms of the GNU Lesser General Public License version 3 (as published by the
 * Free Software Foundation) with the following additional attribution
 * requirements (according to LGPL/GPL v3 §7):
 */
 
// BGL interface for cpu sparse martrix (dynamic CRS).
 
#ifndef UG_SPARSEMATRIX_BOOST_H
#define UG_SPARSEMATRIX_BOOST_H
 
#include "common/util/trace.h"
#include "lib_algebra/cpu_algebra/sparsematrix.h"
 
#include <boost/graph/properties.hpp> // put_get_helper
#include <boost/iterator/counting_iterator.hpp>
 
#include <cstdint> // for std::intmax_t
 
namespace boost{
 
using ug::iszero; // for now
 
// a bit of a pointer dance,
// because ug::SparseMatrix<T>::const_row_iterator is not default constructible.
template<class T>
class SM_adjacency_iterator : public iterator_facade<
  SM_adjacency_iterator<T>,
  typename ug::SparseMatrix<T>::const_row_iterator,
  std::input_iterator_tag,
  size_t, // <= reference
  std::intmax_t // difference_type
   >{ //
  typedef ug::SparseMatrix<T> M;
  typedef typename M::const_row_iterator iter_t;
  typedef iterator_facade<
  SM_adjacency_iterator<T>,
  typename ug::SparseMatrix<T>::const_row_iterator,
  std::input_iterator_tag,
  size_t, // <= reference
  std::intmax_t // difference_type
   > base_class;
 
public:
  typedef iter_t* value_type;
  typedef intmax_t difference_type;
  typedef size_t reference;
 
public:
  SM_adjacency_iterator() : base_class(), _base(nullptr), _end(nullptr){
  }
  SM_adjacency_iterator() : base_class(), _base(nullptr), _end(nullptr) {…}
  SM_adjacency_iterator(SM_adjacency_iterator&& p) = delete;
  SM_adjacency_iterator(SM_adjacency_iterator const& p)
    : _base(p._base?(new iter_t(*p._base)) : nullptr)
    , _end(p._end?(new iter_t(*p._end)) : nullptr){
  }
  SM_adjacency_iterator(SM_adjacency_iterator const& p) {…}
  SM_adjacency_iterator(value_type p, value_type e) : base_class(){
    assert(p);
    _base = new iter_t(*p);
    _end = new iter_t(*e);
    skip_zeroes();
  }
  SM_adjacency_iterator(value_type p, value_type e) : base_class() {…}
  ~SM_adjacency_iterator() {
    delete _base;
    delete _end;
    _base = nullptr;
    _end = nullptr;
  }
  ~SM_adjacency_iterator() {…}
  SM_adjacency_iterator& operator=(SM_adjacency_iterator&& other) = delete;
  SM_adjacency_iterator& operator=(const SM_adjacency_iterator& other) {
    if(other._base){
      delete _base;
      _base = new iter_t(*other._base);
    }else{ untested();
      _base = nullptr;
    }
    if(other._end){
      delete _end;
      _end = new iter_t(*other._end);
    }else{ untested();
      _end = nullptr;
    }
    return *this;
  }
  SM_adjacency_iterator& operator=(const SM_adjacency_iterator& other) {…}
 
  T const& value() const {
    assert(_base);
    return _base->value();
  }
  T const& value() const  {…}
  int row() const {
    assert(_base);
    return _base->row();
  }
  int row() const  {…}
  size_t idx() const { untested();
    assert(_base);
    return _base->idx();
  }
  size_t idx() const { untested(); {…}
  reference dereference() const {
    assert(_base);
    return _base->index(); // row?
  }
  reference dereference() const  {…}
  bool operator==(const SM_adjacency_iterator& other) const {
    assert(_base);
    assert(other._base);
    return *_base == *other._base;
  }
  bool operator==(const SM_adjacency_iterator& other) const  {…}
  bool operator!=(const SM_adjacency_iterator& other) const {
    assert(_base);
    assert(other._base);
    return *_base != *other._base;
  }
  bool operator!=(const SM_adjacency_iterator& other) const  {…}
 
private:
  // could use boost::filter_iterator, but does not work yet.
  void skip_zeroes(){
    while((*_base) != (*_end)){
      if(iszero(_base->value())){
        ++(*_base);
      }else{
        break;
      }
    }
  }
  void skip_zeroes() {…}
  bool equal(SM_adjacency_iterator const& other) const { untested();
    assert(_base);
    assert(other._base);
    return *_base == *other._base;
  }
  bool equal(SM_adjacency_iterator const& other) const { untested(); {…}
  void increment() {
    assert(_base);
    assert(_end);
    ++(*_base);
    skip_zeroes();
  }
  void increment() {…}
  void decrement() { untested();
    // incomplete(); // don't use. too complicated.
    assert(_base);
    --(*_base);
  }
  void decrement() { untested(); {…}
 
private:
  value_type _base;
  value_type _end;
  friend class iterator_core_access;
}; // SM_adjacency_iterator
class SM_adjacency_iterator : public iterator_facade< {…};
 
template<class T>
class SM_edge{
public:
//  SM_edge(size_t v, size_t w) : _row(v), _idx(w) { untested();
//  }
  SM_edge(SM_edge const&) = default;
  SM_edge(SM_edge&&) = default;
  explicit SM_edge() { untested();
  }
  explicit SM_edge() { untested(); {…}
  SM_edge(int s, int t, T const& v) : _source(s), _target(t), _value(v) {
  }
  SM_edge(int s, int t, T const& v) : _source(s), _target(t), _value(v) {…}
  SM_edge& operator=(SM_edge const&) = default;
  SM_edge& operator=(SM_edge&&) = default;
 
public:
  int source() const{
    return _source;
  }
  int source() const {…}
  int target() const{
    return _target;
  }
  int target() const {…}
  template<class X>
  T const& value(X const&) const{
    return _value;
  }
  T const& value(X const&) const {…}
 
public:
  bool operator==(const SM_edge& other) const { untested();
    return _source == other._source && _target == other._target;
  }
  bool operator==(const SM_edge& other) const { untested(); {…}
  bool operator!=(const SM_edge& other) const { untested();
    return !operator==(other);
  }
  bool operator!=(const SM_edge& other) const { untested(); {…}
 
private:
  int _source;
  int _target;
  T _value;
}; // SM_edge
class SM_edge {…};
 
template<class T, class M>
int source(SM_edge<T> const& e, M const&)
{ untested();
  return e.source();
}
int source(SM_edge<T> const& e, M const&) {…}
 
template<class T, class M>
int target(SM_edge<T> const& e, M const&)
{ untested();
  return e.target();
}
int target(SM_edge<T> const& e, M const&) {…}
 
template<class T, bool out=true>
class SM_out_edge_iterator : public iterator_facade<
  SM_out_edge_iterator<T, out>,
  SM_adjacency_iterator<T>,
  // bidirectional_traversal_tag, // breaks InputIterator (why?)
  std::input_iterator_tag,
  SM_edge<T>, // <= reference
  std::intmax_t // difference_type
   >{ //
public: // types
  typedef iterator_facade<
  SM_out_edge_iterator<T, out>,
  SM_adjacency_iterator<T>,
  std::input_iterator_tag,
  SM_edge<T>, // <= reference
  std::intmax_t // difference_type
   > base_class;
  typedef ug::SparseMatrix<T> M;
  typedef SM_adjacency_iterator<T> value_type;
  typedef intmax_t difference_type;
  typedef SM_edge<T> reference;
  typedef SM_edge<T> edge_type;
 
public: // construct
  explicit SM_out_edge_iterator() : base_class() {
  }
  explicit SM_out_edge_iterator() : base_class() {…}
  explicit SM_out_edge_iterator(SM_adjacency_iterator<T> w, int src)
      : base_class(), _base(w), _src(src) {
    if(out){
    }else{
    }
  }
  explicit SM_out_edge_iterator(SM_adjacency_iterator<T> w, int src) {…}
  /* explicit */ SM_out_edge_iterator(SM_out_edge_iterator const& p)
      : base_class(p), _base(p._base), _src(p._src){
    if(out){
    }else{
    }
  }
  /* explicit */ SM_out_edge_iterator(SM_out_edge_iterator const& p) {…}
  SM_out_edge_iterator(SM_out_edge_iterator&& p) = delete; // why?
  ~SM_out_edge_iterator(){
  }
  ~SM_out_edge_iterator() {…}
  SM_out_edge_iterator& operator=(SM_out_edge_iterator&& other) =  default;
  SM_out_edge_iterator& operator=(SM_out_edge_iterator const& other) = default;
#if 0
public: // op
  SM_out_edge_iterator operator+(int a) const{ untested();
    SM_out_edge_iterator ret(*this);
    ret.base.first += a;
    return ret;
  }
  SM_out_edge_iterator operator-(int a) const{ untested();
    SM_out_edge_iterator ret(*this);
    ret.base.first -= a;
    return ret;
  }
  difference_type operator-(SM_out_edge_iterator const& other) const{ untested();
    SM_out_edge_iterator ret(*this);
    return ret.base.first - other.base.first;
  }
#endif
private:
  reference dereference() const {
    if(out){
      return edge_type(_src, *_base, _base.value());
    }else{
      return edge_type(*_base, _src, _base.value());
    }
  }
  reference dereference() const  {…}
  bool equal(SM_out_edge_iterator const& other) const { untested();
    assert(_base.first == other._base.first);
    return _base.second == other._base.second;
  }
  bool equal(SM_out_edge_iterator const& other) const { untested(); {…}
  void increment() { untested();
    ++_base;
  }
  void increment() { untested(); {…}
  void decrement() { untested();
    --_base;
  }
  void decrement() { untested(); {…}
  //      bool operator==(const SM_out_edge_iterator& other) const
  //      { incomplete();
  //        return false;
  //      }
public:
  SM_out_edge_iterator& operator++() {
    ++_base;
    return *this;
  }
  SM_out_edge_iterator& operator++() {…}
  SM_out_edge_iterator operator++(int) { untested();
    SM_out_edge_iterator copy(*this);
    ++*this;
    return copy;
  }
  SM_out_edge_iterator operator++(int) { untested(); {…}
  bool operator==(const SM_out_edge_iterator& other) const {
    return _base == other._base;
  }
  bool operator==(const SM_out_edge_iterator& other) const  {…}
  bool operator!=(const SM_out_edge_iterator& other) const {
    return _base != other._base;
  }
  bool operator!=(const SM_out_edge_iterator& other) const  {…}
 
private:
  value_type _base;
  int _src;
  friend class iterator_core_access;
}; // SM_out_edge_iterator
class SM_out_edge_iterator : public iterator_facade< {…};
 
struct SM_traversal_tag
    : adjacency_graph_tag, bidirectional_graph_tag, vertex_list_graph_tag {};
struct SM_traversal_tag {…};
 
template <class T> struct graph_traits<ug::SparseMatrix<T>>{
  typedef int vertex_descriptor;
  typedef SM_edge<T> edge_descriptor;
  typedef directed_tag directed_category;
  typedef disallow_parallel_edge_tag edge_parallel_category;
  typedef SM_traversal_tag traversal_category;
  typedef counting_iterator<size_t> vertex_iterator;
  typedef SM_out_edge_iterator<T> out_edge_iterator;
  typedef SM_adjacency_iterator<T> adjacency_iterator;
  typedef int degree_size_type;
  typedef int vertices_size_type;
};
template <class T> struct graph_traits<ug::SparseMatrix<T>> {…};
 
template<class T>
std::pair<typename graph_traits<ug::SparseMatrix<T>>::adjacency_iterator,
          typename graph_traits<ug::SparseMatrix<T>>::adjacency_iterator>
inline adjacent_vertices(size_t v, ug::SparseMatrix<T> const& M)
{
  assert(v<M.num_rows());
  typedef typename graph_traits<ug::SparseMatrix<T>>::adjacency_iterator a;
 
  typename ug::SparseMatrix<T>::const_row_iterator b(M.begin_row(v));
  typename ug::SparseMatrix<T>::const_row_iterator e(M.end_row(v));
 
  return std::make_pair(a(&b, &e), a(&e, &e));
}
inline adjacent_vertices(size_t v, ug::SparseMatrix<T> const& M) {…}
 
template<class T>
inline std::pair<SM_out_edge_iterator<T>, SM_out_edge_iterator<T>>
          out_edges(int v, ug::SparseMatrix<T> const& g)
{
  assert(size_t(v)<g.num_rows());
  typedef SM_out_edge_iterator<T> Iter;
   auto a = adjacent_vertices(v, g);
  return std::make_pair(Iter(a.first, v), Iter(a.second, v));
}
          out_edges(int v, ug::SparseMatrix<T> const& g) {…}
 
template<class T>
class sparse_matrix_index_map
    : public put_get_helper<size_t, sparse_matrix_index_map<T> > { //
public:
  typedef size_t vertex_index_type;
  typedef size_t vertex_descriptor;
  typedef readable_property_map_tag category;
  typedef vertex_index_type value_type;
  typedef vertex_index_type reference;
  typedef vertex_descriptor key_type;
 
  sparse_matrix_index_map(sparse_matrix_index_map const& p) {
  }
  sparse_matrix_index_map(sparse_matrix_index_map const& p) {…}
  sparse_matrix_index_map(ug::SparseMatrix<T>const&, boost::vertex_index_t) { untested();
  }
  sparse_matrix_index_map(ug::SparseMatrix<T>const&, boost::vertex_index_t) { untested(); {…}
  template<class X>
  sparse_matrix_index_map(X const&) {
  }
  sparse_matrix_index_map(X const&) {…}
  template <class T_>
  value_type operator[](T_ x) const {
    return x;
  }
  value_type operator[](T_ x) const  {…}
  sparse_matrix_index_map& operator=(const sparse_matrix_index_map& s) { untested();
    return *this;
  }
  sparse_matrix_index_map& operator=(const sparse_matrix_index_map& s) { untested(); {…}
};
class sparse_matrix_index_map {…};
 
template<class T>
struct property_map<ug::SparseMatrix<T>, vertex_index_t>{
  typedef sparse_matrix_index_map<T> type;
  typedef type const_type;
};
struct property_map<ug::SparseMatrix<T>, vertex_index_t> {…};
 
template<class T>
typename property_map<ug::SparseMatrix<T>, vertex_index_t>::const_type
get(vertex_index_t, ug::SparseMatrix<T> const& m)
{
  return sparse_matrix_index_map<T>(m);
}
get(vertex_index_t, ug::SparseMatrix<T> const& m) {…}
 
template<class T>
std::pair<counting_iterator<size_t>, counting_iterator<size_t> > vertices(
      ug::SparseMatrix<T> const& M)
{
  counting_iterator<size_t> b(0);
  counting_iterator<size_t> e(M.num_rows());
 
  return std::make_pair(b,e);
}
std::pair<counting_iterator<size_t>, counting_iterator<size_t> > vertices( {…}
 
template<class T>
int num_vertices(ug::SparseMatrix<T> const& M)
{
  assert(M.num_rows() == M.num_cols());
  return M.num_rows();
}
int num_vertices(ug::SparseMatrix<T> const& M) {…}
 
template<class T>
int out_degree(int v, ug::SparseMatrix<T> const& M)
{
  int c = 0;
  auto i = out_edges(v, M);
  for(; i.first != i.second; ++i.first) {
    ++c;
  }
  return c;
}
int out_degree(int v, ug::SparseMatrix<T> const& M) {…}
 
// template<class T>
// T get(edge_weight_t, ug::SparseMatrix<T> const& M, SM_edge<T> e)
// { untested();
//  return e.value();
// }
 
template<class T, class M=ug::SparseMatrix<T>>
class SM_edge_weight_map :
  public put_get_helper< T /*algebraic connection?*/, SM_edge_weight_map<T> > { //
public:
  typedef T edge_weight_type;
  typedef int vertex_descriptor;
  typedef readable_property_map_tag category;
  typedef edge_weight_type value_type;
  typedef T& reference;
  typedef vertex_descriptor key_type;
 
  SM_edge_weight_map(SM_edge_weight_map const& p) : _g(p._g) { untested();
  }
  SM_edge_weight_map(SM_edge_weight_map const& p) : _g(p._g) { untested(); {…}
  SM_edge_weight_map(ug::SparseMatrix<T>const & g, boost::edge_weight_t) : _g(g) { untested();
  }
  SM_edge_weight_map(ug::SparseMatrix<T>const & g, boost::edge_weight_t) : _g(g) { untested(); {…}
  // bug?
  SM_edge_weight_map(M const& g) : _g(g) {
  }
  SM_edge_weight_map(M const& g) : _g(g) {…}
  template <class X>
  value_type operator[](X const& x) const {
    //        assert(x == _g.position(x));
    return x.value(_g);
  }
  value_type operator[](X const& x) const  {…}
  SM_edge_weight_map& operator=(const SM_edge_weight_map& s) { untested();
    assert(&s._g==&_g); (void)s;
    return *this;
  }
  SM_edge_weight_map& operator=(const SM_edge_weight_map& s) { untested(); {…}
private:
  M const& _g;
}; // SM_edge_weight_map
class SM_edge_weight_map : {…};
 
// g++ 'enumeral_type' in template unification not implemented workaround
template<class T, class Tag>
struct property_map<ug::SparseMatrix<T>, Tag> {
//  typedef typename gala_graph_property_map<Tag>::template bind_<T> map_gen;
//  typedef typename map_gen::type type;
//  typedef typename map_gen::const_type const_type;
};
struct property_map<ug::SparseMatrix<T>, Tag> {…};
 
template<class T>
inline SM_edge_weight_map<T>
//inline typename property_map<ug::SparseMatrix<T>, edge_weight_t>::type
get(edge_weight_t, ug::SparseMatrix<T> const & g) {
  return SM_edge_weight_map<T>(g);
}
get(edge_weight_t, ug::SparseMatrix<T> const & g) {…}
 
#if 0
template<class T>
inline typename property_map<ug::SparseMatrix<T>, edge_all_t>::type
get(edge_all_t, ug::SparseMatrix<T> & g) { incomplete();
  typedef typename property_map<ug::SparseMatrix<T>, edge_all_t>::type
    pmap_type;
  return pmap_type(&g);
}
#endif
 
} // boost
 
namespace ug{
 
// used from boost::print_graph, graph_utility.hpp.
// must be in ug, because of ADL. why don't they call boost::{out_edges,vertices}?
using boost::vertices;
using boost::out_edges;
 
}// ug
 
#endif // guard