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kd_tree_static.h
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1/*
2 * Copyright (c) 2009-2015: G-CSC, Goethe University Frankfurt
3 * Author: Sebastian Reiter
4 *
5 * This file is part of UG4.
6 *
7 * UG4 is free software: you can redistribute it and/or modify it under the
8 * terms of the GNU Lesser General Public License version 3 (as published by the
9 * Free Software Foundation) with the following additional attribution
10 * requirements (according to LGPL/GPL v3 §7):
11 *
12 * (1) The following notice must be displayed in the Appropriate Legal Notices
13 * of covered and combined works: "Based on UG4 (www.ug4.org/license)".
14 *
15 * (2) The following notice must be displayed at a prominent place in the
16 * terminal output of covered works: "Based on UG4 (www.ug4.org/license)".
17 *
18 * (3) The following bibliography is recommended for citation and must be
19 * preserved in all covered files:
20 * "Reiter, S., Vogel, A., Heppner, I., Rupp, M., and Wittum, G. A massively
21 * parallel geometric multigrid solver on hierarchically distributed grids.
22 * Computing and visualization in science 16, 4 (2013), 151-164"
23 * "Vogel, A., Reiter, S., Rupp, M., Nägel, A., and Wittum, G. UG4 -- a novel
24 * flexible software system for simulating pde based models on high performance
25 * computers. Computing and visualization in science 16, 4 (2013), 165-179"
26 *
27 * This program is distributed in the hope that it will be useful,
28 * but WITHOUT ANY WARRANTY; without even the implied warranty of
29 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
30 * GNU Lesser General Public License for more details.
31 */
32
33#ifndef __H__LIB_GRID__KD_TREE__
34#define __H__LIB_GRID__KD_TREE__
35
36#include "lib_grid/grid/grid.h"
37
38namespace ug
39{
40
43
45//KDTREE
46
50{
51 public:
53 KDVertexDistance(Vertex* vrt, float nDistSQ) : vertex(vrt), distSQ(nDistSQ) {}
54
57};
58
66
67typedef std::list<KDVertexDistance> KDVertexDistanceList;
68
71// KDTreeStatic
73
83template <class TPositionAttachment, int numDimensions = 3, class TVector = vector3 >
85{
86 public:
87 typedef std::vector<Vertex*> VertexVec;
88
89 class Node
90 {
91 public:
92 Node() : m_pvVertices(NULL) {m_pChild[0] = m_pChild[1] = NULL;}
93 ~Node() {clear();}
94
95 void clear();
96
97 Node* m_pChild[2]; // 0: pos, 1: neg
101 };
102
103 // the functions
104 KDTreeStatic() : m_pGrid(NULL) {};
105
106 void clear();
107
108 template <class TVrtIterator>
109 bool create_from_grid(Grid& grid, TVrtIterator vrtsBegin, TVrtIterator vrtsEnd,
110 TPositionAttachment& aPos, int maxTreeDepth, int splitThreshold,
111 KDSplitDimension splitDimension = KDSD_LARGEST);
112
113 template <class TVrtIterator>
114 bool create_from_grid(Grid& grid, TVrtIterator vrtsBegin, TVrtIterator vrtsEnd,
116 int maxTreeDepth, int splitThreshold,
117 KDSplitDimension splitDimension = KDSD_LARGEST);
118
119 bool get_neighbourhood(std::vector<Vertex*>& vrtsOut,
120 typename TPositionAttachment::ValueType& pos, int numClosest);
121
122 bool get_points_in_box(std::vector<Vertex*>& vrtsOut,
123 const TVector& boxMin, const TVector& boxMax);
124
126
127 void get_leafs(std::vector<Node*>& vLeafsOut);
128
129 protected:
130 bool get_points_in_box(std::vector<Vertex*>& vrtsOut, Node* pNode,
131 const TVector& boxMin, const TVector& boxMax);
132
133 void neighbourhood(KDVertexDistanceList& vrtsOut, Node* pNode, TVector& pos, int numClosest);
134
135 template <class TVertexIterator>
136 bool create_barycentric(TVertexIterator vrts_begin, TVertexIterator vrts_end,
137 int numVertices, Node* pNode, int actDimension, int maxTreeDepth);
138
139 template <class TVertexIterator>
140 int get_largest_dimension(TVertexIterator vrts_begin, TVertexIterator vrts_end);
141
142 template <class TVertexIterator>
143 int get_next_split_dimension(int actSplitDimension, TVertexIterator vrts_begin,
144 TVertexIterator vrts_end);
145
146 void get_leafs_recursive(std::vector<Node*>& vLeafsOut, Node* pNode);
147
148 // members
153 KDSplitDimension m_splitDimension; // how is the next split dimension choosen?
154
155 // some helper vars for neighbourhood search
158};
159
161
162}// end of namespace
163
165// include implementation
167
168#endif
Manages the elements of a grid and their interconnection.
Definition grid.h:132
Definition kd_tree_static.h:90
float m_fSplitValue
Definition kd_tree_static.h:98
int m_iSplitDimension
Definition kd_tree_static.h:99
~Node()
Definition kd_tree_static.h:93
void clear()
Definition kd_tree_static_impl.hpp:50
Node * m_pChild[2]
Definition kd_tree_static.h:97
VertexVec * m_pvVertices
Definition kd_tree_static.h:100
Node()
Definition kd_tree_static.h:92
organizes vertices in a binary-tree structure. Only for static use!
Definition kd_tree_static.h:85
void clear()
Definition kd_tree_static_impl.hpp:65
void get_leafs(std::vector< Node * > &vLeafsOut)
Definition kd_tree_static_impl.hpp:128
void get_leafs_recursive(std::vector< Node * > &vLeafsOut, Node *pNode)
Definition kd_tree_static_impl.hpp:404
int m_iSplitThreshold
Definition kd_tree_static.h:151
Grid * m_pGrid
Definition kd_tree_static.h:149
bool create_barycentric(TVertexIterator vrts_begin, TVertexIterator vrts_end, int numVertices, Node *pNode, int actDimension, int maxTreeDepth)
Definition kd_tree_static_impl.hpp:278
KDSplitDimension m_splitDimension
Definition kd_tree_static.h:153
float m_maxDistSQ
Definition kd_tree_static.h:157
std::vector< Vertex * > VertexVec
Definition kd_tree_static.h:87
bool get_neighbourhood(std::vector< Vertex * > &vrtsOut, typename TPositionAttachment::ValueType &pos, int numClosest)
Definition kd_tree_static_impl.hpp:104
Grid::VertexAttachmentAccessor< TPositionAttachment > m_aaPos
Definition kd_tree_static.h:150
bool get_points_in_box(std::vector< Vertex * > &vrtsOut, const TVector &boxMin, const TVector &boxMax)
Definition kd_tree_static_impl.hpp:119
void neighbourhood(KDVertexDistanceList &vrtsOut, Node *pNode, TVector &pos, int numClosest)
Definition kd_tree_static_impl.hpp:184
bool create_from_grid(Grid &grid, TVrtIterator vrtsBegin, TVrtIterator vrtsEnd, TPositionAttachment &aPos, int maxTreeDepth, int splitThreshold, KDSplitDimension splitDimension=KDSD_LARGEST)
Definition kd_tree_static_impl.hpp:75
Node m_parentNode
Definition kd_tree_static.h:152
int m_numNeighboursFound
Definition kd_tree_static.h:156
KDTreeStatic()
Definition kd_tree_static.h:104
int get_next_split_dimension(int actSplitDimension, TVertexIterator vrts_begin, TVertexIterator vrts_end)
Definition kd_tree_static_impl.hpp:385
int get_largest_dimension(TVertexIterator vrts_begin, TVertexIterator vrts_end)
Definition kd_tree_static_impl.hpp:340
Node * get_root()
Definition kd_tree_static.h:125
used by KDTreeStatic
Definition kd_tree_static.h:50
KDVertexDistance()
Definition kd_tree_static.h:52
number distSQ
Definition kd_tree_static.h:56
Vertex * vertex
Definition kd_tree_static.h:55
KDVertexDistance(Vertex *vrt, float nDistSQ)
Definition kd_tree_static.h:53
Base-class for all vertex-types.
Definition grid_base_objects.h:231
std::list< KDVertexDistance > KDVertexDistanceList
Definition kd_tree_static.h:67
KDSplitDimension
used by KDTreeStatic
Definition kd_tree_static.h:62
@ KDSD_LARGEST
Definition kd_tree_static.h:64
@ KDSD_CIRCULAR
Definition kd_tree_static.h:63
double number
Definition types.h:124
the ug namespace